Index

A

adapt_step() (in module grow_tree) add_child() (tree.Segment method)

add_segment() (tree.Tree method)

B

Box (class in refinement) branch_distance() (tree.Tree method) branch_in_xz() (in module parameters)

branch_label() (tree.Tree method) branches() (tree.Tree method) build_lists() (refinement.Box method)

C

collect() (refinement.Box method) collect_inward() (refinement.Box method)

collect_solutions() (refinement.Box method) containing_box() (in module refinement)

D

desc() (in module parameters) downward() (refinement.Box method)

dummy() (in module parameters)

E

electrode_geometry() (in module parameters) electrode_potential() (in module parameters) end_with_reconnection() (in module parameters) eval_subtree() (refinement.Box method) expand() (in module readinput) (refinement.Box method)

expand_dict() (in module readinput) expand_input() (in module readinput) extend() (tree.Tree method) external_field() (in module grow_tree) (in module parameters) external_potential() (in module grow_tree)

F

fixed_branching_angle() (in module parameters)

from_parents() (tree.Tree static method)

G

get() (tree.Segment method) grow_tree (module)

guess_type() (in module readinput)

I

init_electrode() (in module grow_tree) init_from_scratch() (in module grow_tree)

is_near_neighbour() (refinement.Box method) iter_adjacent() (tree.Segment method)

L

lengths() (tree.Tree method) load_input() (in module readinput)

loadtxt() (tree.Tree static method)

M

main() (in module grow_tree) make_root() (tree.Tree method)

max_step() (in module parameters) midpoints() (tree.Tree method)

N

nonnegative() (in module readinput)

O

ohm_matrix() (tree.Tree method)

out_file() (in module parameters)

P

parameters (module) parents() (tree.Tree method)

positive() (in module readinput)

R

rand() (in module grow_tree) randn() (in module grow_tree) random_branching_tree() (in module tree) random_seed() (in module parameters) readinput (module)

reconnects() (tree.Tree method) refine() (refinement.Box method) refinement (module) relax() (in module grow_tree) run_name() (in module parameters)

S

sample_endpoints() (in module tree) save() (tree.Tree method) seed() (in module grow_tree) Segment (class in tree) self_fields() (in module grow_tree) set() (tree.Segment method) set_charges() (refinement.Box method)

set_evaluation() (refinement.Box method) set_field_evaluation() (refinement.Box method) single_branching_z() (in module parameters) solve() (refinement.Box method) solve_all() (refinement.Box method) step() (in module grow_tree) symmetric_gaussian() (in module grow_tree)

T

terminals() (tree.Tree method) Tree (class in tree)

tree (module)

U

uniform() (in module tree) update_charges() (refinement.Box method)

upward() (refinement.Box method)

V

velocities() (in module grow_tree)

Z

zeros() (tree.Tree method)